Group members are in bold
- Watts S, Migicovsky Z, Myles S (2023) Large-scale apple GWAS reveals NAC18.1 as a master regulator of ripening traits. Fruit Research 3:32
- Soomro T, Jordan M, Watts S, Migicovsky Z, Forney CF, Song J, Myles S (2023) Genomic insights into apple aroma diversity. Fruit Research 3:27
- Davies T, Myles S (2023) Pool-seq of diverse apple germplasm reveals candidate loci underlying ripening time, phenolic content, and softening. Fruit Research 3:11
- Migicovsky Z, Douglas G, Myles S (2022) Genotyping-by-sequencing of Canada’s apple biodiversity collection. Frontiers in Genetics 13:934712
- Soomro T, Watts S, Migicovsky Z, Myles S (2022) Cider and dessert apples: What's the difference? Plants, People, Planet 3:10284
- Davies T, Watts S, McClure K, Migicovsky Z, Myles S (2022) Phenotypic divergence between the cultivated apple (Malus domestica) and its primary wild progenitor (Malus sieversii). PLoS ONE 17(3): e0250751
- Watts S, McElroy M, Migicovsky Z, Maassen H, van Velzen R, Myles S (2021) Cannabis labelling is associated with genetic variation in terpene synthase genes. Nature Plants 7:1330–1334
- Watts S, Migicovsky Z, McClure KA, Yu CHJ, Amyotte B, Baker T, Bowlby D, Burgher-MacLellan K, Butler L, Donald R, Fan L, Fillmore S, Flewelling J, Gardner K, Hodges M, Hughes T, Jagadeesan V, Lewis N, MacDonell E, MacVicar L, McElroy M, Money D, O’Hara M, Ong Q, Campbell Palmer L, Sawler J, Vinqvist-Tymchuk M, Rupasinghe HPV, DeLong JM, Forney CF, Song J, Myles S (2021) Quantifying apple diversity: A phenomic characterization of Canada’s Apple Biodiversity Collection. Plants, People, Planet 3:747-7603:747–760
- Migicovsky Z, Yeats TH, Watts S, Song J, Forney CF, Burgher-MacLellan K, Somers DJ, Gong Y, Zhang Z, Vrebalov J, van Velzen R, Giovannoni JG, Rose JKC, Myles S (2021) Apple Ripening Is Controlled by a NAC Transcription Factor. Frontiers in Genetics 12:908
- Migicovsky Z, Gardner KM, Richards C, Chao CT, Schwaninger HR, Fazio G, Zhong GY, Myles S (2021) Genomic consequences of apple improvement. Horticulture Research 8:9
- Migicovsky Z, Cousins P, Jordan LM, Myles S, Striegler RK, Verdegaal P, Chitwood DH (2021) Grapevine rootstocks affect growth-related scion phenotypes. Plant Direct 5:e00324
- McClure KA, Gong YH, Song J, Vingqvst-Tymchuk M, Campbell Palmer L, Fan L, Burgher-MacLellan K, Zhang ZQ, Celton J-M, Forney CF, Migicovsky Z, Myles S (2019) Genome-wide association studies in apple reveal loci of large effect controlling apple polyphenols. Horticulture Research 6:107
- Larsen B, Migicovsky Z, Jeppesen AA, Gardner KM, Toldam-Andersen TB, Myles S, Ørgaard M, Petersen MA, Pedersen C (2019) Genome-Wide Association Studies in Apple Reveal Loci for Aroma Volatiles, Sugar Composition, and Harvest Date. The Plant Genome 12(2):1
- Peace CP, Bianco L, Troggio M, van de Weg E, Howard NP, Cornille A, Durel C-E, Myles S, Migicovsky Z, Schaffer RJ, Costes E, Fazio G, Yamane H, van Nocker S, Gottschalk C, Costa F, Chagné D, Zhang X, Patocchi A, Gardiner SE, Hardner C, Kumar S, Laurens F, Bucher E, Main D, Jung S, Vanderzande S (2019) Apple whole genome sequences: recent advances and new prospects. Horticulture Research 6:59
- Larsen B, Gardner KM, Pedersen C, Ørgaard M, Migicovsky Z, Myles S, Toldam-Andersen TB (2018) Population structure, relatedness and ploidy levels in an apple gene bank revealed through genotyping-by-sequencing. PLoS ONE 13(8): e0201889
- Li M, An H, Angelovici R, Bagaza C, Batushansky A, Clark L, Coneva V, Donoghue M, Edwards E, Fajardo E, Fang H, Frank M, Gallaher T, Gebken S, Hill TA, Jansky S, Kaur B, Klahs P, Klein LL, Kuraparthy V, Londo J, Migicovsky Z, Miller A, Mohn R, Myles S, Otoni W, Pires JC, Rieffer E, Schmerler S, Spriggs E, Topp CN, Van Deynze A, Zhang K, Zhu L, Zink B, Chitwood DH (2018) Topological data analysis as a morphometric method: using persistent homology to demarcate a leaf morphospace. Frontiers in Plant Science 9:553
- McElroy M, Romero Navarro JA, Mustiga GM, Stack JC, Gezan S, Penha G, Sarabia W, Saquicela D, Sotomayor I, Douglas G, Migicovsky Z, Amores F, Myles S, Motamayor Arias JC (2018) Prediction of Cacao (Theobroma cacao) Resistance to Moniliophthora spp. Diseases via Genome-Wide Association Analysis and Genomic Selection. Frontiers in Plant Science 9:343
- McClure KA, Gardner KM, Douglas GM, Song J, Forney CF, DeLong J, Fan L, Toivonen PMA, Somers DJ, Rajcan I, Myles S (2018) A Genome-Wide Association Study of Apple Quality and Scab Resistance. The Plant Genome 11:170075
- Migicovsky Z, Li M, Chitwood DH, Myles S (2018) Morphometrics Reveals Complex and Heritable Apple Leaf Shapes. Frontiers in Plant Science 8:2185
- Migicovsky Z, Sawler J, Gardner KM, Aradhya MK, Prins BH, Schwaninger HR, Bustamante CD, Buckler ES, Zhong GY, Brown PJ, Myles S (2017) Patterns of genomic and phenomic diversity in wine and table grapes. Horticulture Research 4:17035
- Money D, Migicovsky Z, Gardner K, Myles S (2017) LinkImputeR: user-guided genotype calling and imputation for non-model organisms. BMC Genomics 18:523
- Migicovsky Z, Myles S (2017) Exploiting wild relatives for genomics-assisted breeding of perennial crops. Frontiers in Plant Science 8:460
- McClure KA, Gardner KM, Toivonen PMA, Hampson CR, Song J, Forney CF, DeLong J, Rajcan I, Myles S (2016) QTL analysis of soft scald in two apple populations. Horticulture Research 3:16043
- Migicovsky Z, Sawler J, Money D, Eibach R, Miller AJ, Luby JJ, Jamieson AR, Velasco D, von Kintzel S, Warner J, Wuhrer W, Brown PJ, Myles S (2016) Genomic ancestry estimation quantifies use of wild species in grape breeding. BMC Genomics 17:478
- Migicovsky Z, Gardner KM, Money D, Sawler J, Bloom JS, Moffett P, Chao CT, Schwaninger H, Fazio G, Zhong GY, Myles S (2016) Genome to phenome mapping in apple using historical data. The Plant Genome 9:2
- Goto-Yamamoto N, Sawler J, Myles S (2015) Genetic analysis of East Asian grape cultivars suggests hybridization with wild Vitis. PLoS ONE 10:e0140841
- Sawler J, Stout JM, Gardner KM, Hudson D, Vidmar J, Butler L, Page JE, Myles S (2015) The genetic structure of marijuana and hemp. PLoS ONE 10:e0133292
- Money D, Gardner KM, Migicovsky Z, Schwaninger H, Zhong GY, Myles S (2015) LinkImpute – fast and accurate genotype imputation for non-model organisms. G3: Genes, Genomes, Genetics 5:2383
- Myles S, Mahanil S, Harriman J, Gardner KM, Franklin JL, Reisch BI, Ramming DW, Owens CL, Li L, Buckler ES, Cadle-Davidson L (2015) Genetic mapping in grapevine using SNP microarray intensity values. Molecular Breeding 35:88
- McClure KA, Sawler J, Gardner KM, Money D, Myles S (2014) Genomics: a potential panacea for the perennial problem. American Journal of Botany 101:1597
- Gardner KM, Brown PJ, Cooke TF, Cann S, Costa F, Bustamante CD, Velasco R, Troggio M, Myles S (2014) Fast and cost-effective genetic mapping in apple using next-generation sequencing. G3: Genes, Genomes, Genetics 4:1681
- Sawler J, Reisch BI, Aradhya MK, Prins BH, Zhong GY, Schwaninger H, Simon C, Buckler ES, Myles S (2013) Genomics assisted ancestry deconvolution in grape. PLoS ONE 8:e80791
- Miller AJ, Matasci N, Aradhya MK, Prins B, Zhong GY, Schwaninger H, Simon C, Buckler ES, Myles S (2013) Vitis phylogenomics: hybridization intensities from a SNP array outperform genotype calls. PLoS ONE 8:e78680
- McCouch S, Baute GJ, Bradeen J, Bramel P, Bretting PK, Buckler E, Burke JM, Charest D, Cloutier S, Cole G, Dempewolf H, Dingkuhn M, Feuillet C, Gepts P, Grattapaglia D, Guarino L, Jackson S, Knapp S, Langridge P, Lawton-Rauh A, Lijua Q, Lusty C, Michael T, Myles S, Naito K, Nelson RL, Pontarollo R, Richards CM, Rieseberg L, Ross-Ibarra J, Rounsley S, Hamilton RS, Schurr U, Stein N, Tomooka N, van der Knaap E, van Tassel D, Toll J, Valls J, Varshney RK, Ward J, Waugh R, Wenzl P, Zamir D (2013) Agriculture: Feeding the future. Nature 499:23
- Myles S (2013) Improving fruit and wine: what does genomics have to offer? Trends in Genetics 29:190