Package Similarity
Class CalculatedSimilar
- java.lang.Object
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- Similarity.CalculatedSimilar
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Constructor Summary
Constructors Constructor Description CalculatedSimilar(Correlation corr, byte[][] data, int n)
Constructor
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description java.lang.Integer[]
getSimilar(int p)
Get an array of most similar sites for the given site
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Constructor Detail
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CalculatedSimilar
public CalculatedSimilar(Correlation corr, byte[][] data, int n)
Constructor- Parameters:
corr
- Method used to calculate correlationdata
- The genotype datan
- The number of top hits to calculate
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Method Detail
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getSimilar
public java.lang.Integer[] getSimilar(int p)
Description copied from interface:Similar
Get an array of most similar sites for the given site- Specified by:
getSimilar
in interfaceSimilar
- Parameters:
p
- The given site id- Returns:
- The ids of the most similar sites
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