Package VCF.Changers
Provides classes for changing a genotype.
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Interface Summary Interface Description GenotypeChanger Changes a genotypePositionChanger Changes a position -
Class Summary Class Description MaxDepthNoReadsChanger Changes the genotype (the GT field) of genotype to unknown (./.) if the total number of reads is less than a thresholdMinDepthMissingChanger Changes the genotype (the GT field) of genotype to unknown (./.) if the total number of reads is less than a thresholdRenameFormatChanger Renames a formatStandardizeCountsFormatChanger Changes readcounts included in two formats to the new single format (AD) specification