Package VCF.Changers
Class StandardizeCountsFormatChanger
- java.lang.Object
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- VCF.Changers.StandardizeCountsFormatChanger
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- All Implemented Interfaces:
PositionChanger
public class StandardizeCountsFormatChanger extends java.lang.Object implements PositionChanger
Changes readcounts included in two formats to the new single format (AD) specification
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Constructor Summary
Constructors Constructor Description StandardizeCountsFormatChanger(java.lang.String ref, java.lang.String alt)
Constructor
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description void
change(Position p)
Change the given genotype
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Method Detail
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change
public void change(Position p) throws VCFNoDataException
Description copied from interface:PositionChanger
Change the given genotype- Specified by:
change
in interfacePositionChanger
- Parameters:
p
- The position to change- Throws:
VCFNoDataException
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