Packages 
Package Description
Accuracy
Provides classes for calculating accuracy.
Callers
Provides classes for calculating called genotype probabilities.
Combiner
Provides classes for combining called and imputed genotyped probabilities.
Exceptions
Provides exceptions
Executable
Provides classes related to the LinkImputeR executable
Imputers
Provides classes for calculating imputed genotype probabilities.
Utils
Provides utility classes
Utils.Correlation
Provides classes for calculating correlations.
Utils.Distribution
Provides classes that represent Distributions
Utils.Optimize
Provides classes optimizing functions.
Utils.Progress
Provides classes representing calculation process
Utils.SingleGenotype
Provides classes for representing a single genotype.
VCF
Provides classes for representing and working with the data in a VCF file.
VCF.Changers
Provides classes for changing a genotype.
VCF.Exceptions
Provides classes for VCF Exceptions.
VCF.Filters
Provides classes for filter a VCF.
VCF.Mappers
Provides classes for mapping the strings in a VCF to other data types.
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