Interface | Description |
---|---|
GenotypeChanger |
Changes a genotype
|
PositionChanger |
Changes a position
|
Class | Description |
---|---|
MaxDepthNoReadsChanger |
Changes the genotype (the GT field) of genotype to unknown (./.) if the
total number of reads is less than a threshold
|
MinDepthMissingChanger |
Changes the genotype (the GT field) of genotype to unknown (./.) if the
total number of reads is less than a threshold
|
RenameFormatChanger |
Renames a format
|
StandardizeCountsFormatChanger |
Changes readcounts included in two formats to the new single format (AD)
specification
|